MRIQC: individual T1w report

Summary

  • BIDS filename: sub-3054_ses-1_T1w.
  • Date and time: 2022-10-25, 22:15.
  • MRIQC version: 0.16.1.

Visual reports

Zoomed-in (brain mask)
Background noise

Other

cjv0.6340998994427595
cnr2.0201570425875
efc0.6119230617326353
fber1361.1551064927753
fwhmavg4.138076666666667
fwhmx4.05368
fwhmy4.61072
fwhmz3.74983
icvscsf0.2014389932827698
icvsgm0.41676197173054996
icvswm0.3817990349866802
inumed1.7561051845550537
inurange0.721153664588928
qi10.0
qi20.0025777425673418697
rpvecsf24.15528858632689
rpvegm12.26298956776098
rpvewm15.799714564130594
sizex176
sizey256
sizez256
snrcsf2.466516939386571
snrgm8.160291979518123
snrtotal10.821840771425578
snrwm21.83871339537204
snrdcsf29.14585114649608
snrdgm65.35262074825512
snrdtotal59.27826695329944
snrdwm83.33632896514712
spacingx1.0
spacingy1.0
spacingz1.0
summarybgk545.85986441697
summarybgmad7.861787954554927
summarybgmean15.96884130289286
summarybgmedian14.692885152995586
summarybgn2581864.0
summarybgp055.634113855659962
summarybgp9531.8161723613739
summarybgstdv8.910106034701494
summarycsfk50.68139846095992
summarycsfmad86.56156112463081
summarycsfmean380.8274860158022
summarycsfmedian349.7569503337145
summarycsfn37757.0
summarycsfp05248.22138082906605
summarycsfp95599.1493430621922
summarycsfstdv141.80008782201892
summarygmk-0.000949567755998082
summarygmmad93.68630645844621
summarygmmean794.8840529808566
summarygmmedian784.2465541437268
summarygmn21960.0
summarygmp05655.3800087980926
summarygmp95973.8786745149641
summarygmstdv96.1030193107769
summarywmk0.5260655221005126
summarywmmad43.157940125525485
summarywmmean998.7513300747005
summarywmmedian1000.0552093796432
summarywmn241256.0
summarywmp05920.9014333486557
summarywmp951071.0892330892384
summarywmstdv45.792676458114286
tpmoverlapcsf0.1717095822095871
tpmoverlapgm0.4601983428001404
tpmoverlapwm0.5082889199256897
wm2max0.5502203312566479
AcquisitionMatrixPE256
AcquisitionNumber1
AcquisitionTime10:31:48.265000
BaseResolution256
BodyPartExaminedBRAIN
CoilCombinationMethodAdaptive Combine
ConsistencyInfoN4_VE11C_LATEST_20160120
ConversionSoftwaredcm2niix
ConversionSoftwareVersionv1.0.20211006
Dcm2bidsVersion2.1.6
DeviceSerialNumber67034
DwellTime3e-06
EchoTime0.00169
FlipAngle7
ImageOrientationPatientDICOM[0.017555, 0.999655, -0.0195316, -0.0393205, -0.0188292, -0.999049]
ImageOrientationTextSag>Tra(2.2)>Cor(1.0)
ImageType['ORIGINAL', 'PRIMARY', 'OTHER', 'ND', 'NORM', 'MEAN']
ImagingFrequency123.258
InPlanePhaseEncodingDirectionDICOMROW
InstitutionAddressFairbanks 710,Chicago ,Chicago,US,60611
InstitutionNameNU Tuna
InstitutionalDepartmentNameDepartment
InversionTime1.16
MRAcquisitionType3D
MagneticFieldStrength3
ManufacturerSiemens
ManufacturersModelNamePrisma_fit
MatrixCoilModeGRAPPA
ModalityMR
NumberOfAverages3
ParallelReductionFactorInPlane2
PartialFourier0.75
PatientPositionHFS
PercentPhaseFOV100
PercentSampling100
PhaseEncodingSteps191
PhaseResolution1
PixelBandwidth650
ProcedureStepDescriptionfMRI_STUDIES^MITTAL
ProtocolNametfl_epinav_ME3_1mm_p2
PulseSequenceDetails%CustomerSeq%\tfl_mgh_epinav_ABCD
ReceiveCoilActiveElementsHC1-7;NC1,2
ReceiveCoilNameHeadNeck_64
ReconMatrixPE256
RefLinesPE36
RepetitionTime2.17
SAR0.0324583
ScanOptionsIR\PFP\WE
ScanningSequenceGR\IR
SequenceNametfl3d3_16ns
SequenceVariantSK\SP\MP
SeriesDescriptiontfl_epinav_ME3_1mm_p2 RMS
SeriesNumber8
ShimSetting[2635, 5528, -7438, 211, -88, -987, 75, -238]
SliceThickness1
SoftwareVersionssyngo MR E11
SpoilingStateTrue
StationNameMRC35427
TxRefAmp261.066
WipMemBlockPrisma_epi_moco_navigator_ABCD_tfl.prot
md5sum1a4e647aadfeda7a79f90db4a32bab29
softwaremriqc
version0.16.1
Rate Image
Download

For details on the IQMs (image quality metrics) and further information on the enclosed plots, please read the documentation.